CDS

Accession Number TCMCG057C45915
gbkey CDS
Protein Id XP_018449928.1
Location complement(join(17511957..17512169,17512330..17512539,17512632..17512793,17512912..17513364))
Gene LOC108821387
GeneID 108821387
Organism Raphanus sativus

Protein

Length 345aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018594426.1
Definition PREDICTED: UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 1-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category G
Description BEST Arabidopsis thaliana protein match is RGXT1 (rhamnogalacturonan xylosyltransferase 1)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01003        [VIEW IN KEGG]
KEGG_ko ko:K11714        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000271        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0005976        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006486        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008194        [VIEW IN EMBL-EBI]
GO:0008378        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009100        [VIEW IN EMBL-EBI]
GO:0009101        [VIEW IN EMBL-EBI]
GO:0009664        [VIEW IN EMBL-EBI]
GO:0009832        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010306        [VIEW IN EMBL-EBI]
GO:0010383        [VIEW IN EMBL-EBI]
GO:0010393        [VIEW IN EMBL-EBI]
GO:0010396        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016051        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016757        [VIEW IN EMBL-EBI]
GO:0016758        [VIEW IN EMBL-EBI]
GO:0016763        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0033692        [VIEW IN EMBL-EBI]
GO:0034637        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0035250        [VIEW IN EMBL-EBI]
GO:0035252        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042285        [VIEW IN EMBL-EBI]
GO:0042546        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043413        [VIEW IN EMBL-EBI]
GO:0044036        [VIEW IN EMBL-EBI]
GO:0044038        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044262        [VIEW IN EMBL-EBI]
GO:0044264        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045229        [VIEW IN EMBL-EBI]
GO:0045488        [VIEW IN EMBL-EBI]
GO:0045489        [VIEW IN EMBL-EBI]
GO:0052325        [VIEW IN EMBL-EBI]
GO:0052546        [VIEW IN EMBL-EBI]
GO:0070085        [VIEW IN EMBL-EBI]
GO:0070589        [VIEW IN EMBL-EBI]
GO:0070592        [VIEW IN EMBL-EBI]
GO:0071554        [VIEW IN EMBL-EBI]
GO:0071555        [VIEW IN EMBL-EBI]
GO:0071669        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGCATCAGCTTTTATATTCCTCTCCTCTTTCTTATTCTTCAACCTCAAAGGGTCGTCATATCTCTCTCATGAGCCGCAACGGTCTCCTTCTTGTCGCTCTCCTCGTCATCCTCGGTGTATACTTACCCTGGGTAAGATCTCCCTTATTCCTGTTTCCAAACAGAACTTTTTCTTCTTTTTCCCCCAACTGGCGCAACTATTCTCTCGCTCAAGCAGCTAAGTTCGTCGCTAAGGACGGAACAGTGATAGTATGCACCGTTAGCTATCCCTTCTTGCCTTTCCTCAACAACTGGTTAATTAGCGTTTCTAGACAGAAGCATCAAGACAAAGTCCTCGTGATCGCTGAGGATTACGCTACACTTTACAAGATTAACAAGAAGTGGCCTGGCCATGCCGTTCTCGTTCCCCCAGCTCTCAATTCTCAGACCGCACATAAGTTCGGTTCCAAGGGTTTCTTCAATTTTACATCTCGGAGGCCGCAACATCTCTTGCGACTTTTGGAGCTAGGCTATAATGTGATGTACAACGATGTTGATATGGTCTGGTTGCAAGATCCGTTTCAGTATTTACAAGGAAGCCACGAAGCATACTTCACAGATGACAGGACTAGAATTAAGCCTTTGAATCATTCCCATTGTTTACCACCTCCGGATCGAAACGGAGTGACTTATATATGTAGCTGCATGATTTTCTTGCGTCCCAAGACTGGAGCAAAGCTTCTCATGAAGAAATGGATTGATGAACTTCATGCTGGATCTAAAGTGTATGAAGGAAATGATCAGCCTGCTTTCAACTGGGCACTCAACAAAACTGCTCATCAGCTAGATCTATACTTGCTACCGCAAGCAGCGTTTCCAACAGGAGGATTGTATTTCAAGAACAAGACATGGGTTGAAGAGACAAAGGGGAAACATGTCATAGTCCACAACAACTACATTATCGGTTACAACAATAAGATGAAACGCTTCCGTGACTTTGGTCTATGGCTAATTGATGATCATTCTTTAGAGTCCCCACTGGGAAAACTAGAGTAA
Protein:  
MAHQLLYSSPLSYSSTSKGRHISLMSRNGLLLVALLVILGVYLPWVRSPLFLFPNRTFSSFSPNWRNYSLAQAAKFVAKDGTVIVCTVSYPFLPFLNNWLISVSRQKHQDKVLVIAEDYATLYKINKKWPGHAVLVPPALNSQTAHKFGSKGFFNFTSRRPQHLLRLLELGYNVMYNDVDMVWLQDPFQYLQGSHEAYFTDDRTRIKPLNHSHCLPPPDRNGVTYICSCMIFLRPKTGAKLLMKKWIDELHAGSKVYEGNDQPAFNWALNKTAHQLDLYLLPQAAFPTGGLYFKNKTWVEETKGKHVIVHNNYIIGYNNKMKRFRDFGLWLIDDHSLESPLGKLE